GenomeCalculator 1.0.0

.NET Core 3.1 This package targets .NET Core 3.1. The package is compatible with this framework or higher. 
dotnet add package GenomeCalculator --version 1.0.0                

                    
                

            
NuGet\Install-Package GenomeCalculator -Version 1.0.0
This command is intended to be used within the Package Manager Console in Visual Studio, as it uses the NuGet module's version of Install-Package. 
<PackageReference Include="GenomeCalculator" Version="1.0.0" />
For projects that support PackageReference, copy this XML node into the project file to reference the package. 
paket add GenomeCalculator --version 1.0.0                

                    
                

            
#r "nuget: GenomeCalculator, 1.0.0"
#r directive can be used in F# Interactive and Polyglot Notebooks. Copy this into the interactive tool or source code of the script to reference the package. 
// Install GenomeCalculator as a Cake Addin
#addin nuget:?package=GenomeCalculator&version=1.0.0

// Install GenomeCalculator as a Cake Tool
#tool nuget:?package=GenomeCalculator&version=1.0.0

GenomeCalculator

A nuget package that reads .fasta files and do some bioinformatic calculations.

To implement the nuget use namespaces: using GenomeCalculator; using GenomeCalculator.Implentation;

This class library reads fasta or any textfile that contains a DNA sequence. The nuget calculates a gene's GC composition, helpful to determine the gene's quality. Also the sequence's baselength can calculated.

Examples

        Example: 1 ==> Generate the basepairlength
        
        string filepath = @"C:\Users\...\sequence.fasta";
        Context myDNA = new Context(operation: new Length());
        double result = myDNA.execute(filepath);
        Console.WriteLine("DNA ==> " + result );
        
        
        Example: 2 ==> Generate the GC ration
        
        string filepath = @"C:\Users\...\sequence.fasta";
        Context myDNA = new Context(operation: new Ratio());
        double result = myDNA.execute(filepath);
        Console.WriteLine("DNA ==> " + result );
Product Compatible and additional computed target framework versions.
.NET net5.0 was computed.  net5.0-windows was computed.  net6.0 was computed.  net6.0-android was computed.  net6.0-ios was computed.  net6.0-maccatalyst was computed.  net6.0-macos was computed.  net6.0-tvos was computed.  net6.0-windows was computed.  net7.0 was computed.  net7.0-android was computed.  net7.0-ios was computed.  net7.0-maccatalyst was computed.  net7.0-macos was computed.  net7.0-tvos was computed.  net7.0-windows was computed.  net8.0 was computed.  net8.0-android was computed.  net8.0-browser was computed.  net8.0-ios was computed.  net8.0-maccatalyst was computed.  net8.0-macos was computed.  net8.0-tvos was computed.  net8.0-windows was computed. 
.NET Core netcoreapp3.1 is compatible. 
Compatible target framework(s)
Included target framework(s) (in package)
Learn more about Target Frameworks and .NET Standard.

  • .NETCoreApp 3.1

    • No dependencies.

NuGet packages

This package is not used by any NuGet packages.

GitHub repositories

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Version Downloads Last updated
1.0.0 221 11/18/2022